Class List

Here are the classes, structs, unions and interfaces with brief descriptions:

GOGrapher.DOMLight.DOMLightObject
GOGrapher.Storage.FilebasedStorage.FilebasedStorage	Abstract class / Interface for all storage implementations
GOGrapher.GODiGraph.GODiGraph	This class represents a directed graph based on the Gene Ontology information for a given species and aspect
GOGrapher.GOError.GOError	Singleton error logging class
GOGrapher.GOGraph.GOGraph
GOGrapher.GOGraphBase.GOGraphBase
GOGrapher.GONode.GONode
GOGrapher.Storage.FilebasedStorage.GOOboXmlHandler	A SAX parser for GO OBO XML files
GOGrapher.Storage.FilebasedStorage.GOOwlHandler	A SAX parser for OWL files
GOGrapher.GOError.GOPercentMessage	Class to handle percent logging to terminal p = GOPercentMessage(totalsize) p.update() # run many times p.finished()
GOGrapher.GOProteinGraph.GOProteinGraph
GOGrapher.GONode.GOProteinNode
GOGrapher.GONode.GOTermNode
GOGrapher.GOXDiGraph.GOXDiGraph
GOGrapher.GOXGraph.GOXGraph
GOGrapher.XGraphWeighters.ICWeighter.ICWeighter
GOGrapher.Storage.MysqlStorage.MysqlStorage
GOGrapher.XGraphWeighters.SimpleWeighter.SimpleWeighter
GOGrapher.StorageFactory.StorageFactory	Simple singleton factory for making storage mechanisms
GOGrapher.Storage.StorageInterface.StorageInterface	Abstract class / Interface for all storage implementations
GOGrapher.Storage.Types	Storage types symbols
GOGrapher.XGraphWeighters.WeightingInterface.WeightingInterface
GOGrapher.DOMLight.XMLMaker	This class is used to generate xml
GOGrapher.DOMLight.XMLMaker.Elem	Inner class representing an XML element